×
验证码:
换一张
忘记密码？
记住我
×
登录
中文版
|
English
中国科学院昆明植物研究所知识管理系统
Knowledge Management System of Kunming Institute of Botany,CAS
登录
注册
ALL
ORCID
题名
作者
学科领域
关键词
资助项目
文献类型
出处
收录类别
出版者
发表日期
存缴日期
学科门类
学习讨论厅
图片搜索
粘贴图片网址
首页
研究单元&专题
作者
文献类型
学科分类
知识图谱
新闻&公告
研究单元&专题
中国科学院东亚植... [206]
昆明植物所硕博研... [138]
共享文献 [121]
中国西南野生生物种... [57]
资源植物与生物技术... [48]
植物化学与西部植物... [17]
更多...
作者
孙航 [76]
李德铢 [73]
龚洵 [27]
邓涛 [26]
杨祝良 [25]
伊廷双 [22]
更多...
文献类型
期刊论文 [547]
学位论文 [138]
专著 [35]
其他 [2]
会议录 [1]
发表日期
2021 [40]
2020 [82]
2019 [65]
2018 [42]
2017 [73]
2016 [65]
更多...
语种
英语 [395]
中文 [96]
出处
MOLECULAR... [40]
PLOS ONE [31]
JOURNAL O... [29]
FUNGAL DI... [27]
SCIENTIFI... [17]
FRONTIERS... [14]
更多...
资助项目
GST,p < 0.001) and low levels of seed-based gene flow. C. debaoensis (Cycadaceae) is an endangered species restricted to the border of Guangxi and Yunnan province in southwest China. This species has been classified into two types: sand and karst, according to the soil matrix they grow on. We examined chloroplast sequence variation of the cpDNA sequences from 11 populations of this species. Significant population genetic differentiation was detected (GST= 0.684 and FST = 0.74160). There was marked genetic differentiation between populations in the sand and karst regions and no expansion was detected. Climate changes during glacial periods have had significant effects on the current distribution of cycads. The molecular phylogenetic data, together with the geographic distribution of the haplotypes, suggest that C. debaoensis experienced range contraction during glacial periods, and that the current populations are still confined to the original refugia in southwest China which have favorable habitats in glacial period. These results imply that small refugia were maintained in both sand and karst regions during the LGM (last glacial maximum). This species had no postglacial recolonization and only stayed in these refugia up to now. The low within-population diversity of C. debaoensis suggests that there were strong bottleneck events or founder effects within each separate region during the Quaternary climatic oscillations. Relatively high genetic and haplotype diversities were detected in the newly discovered populations, which located at intermediate locality of sand regions and had morphological variation; this is probably the consequence of the admixture of different haplotypes colonizing the area from separate sources. C. micholitzii occurs in the Annan Highlands in central Vietnam near the Laos border. C. bifida occurs in North Vietnam; its distribution extends across the border into adjacent localities in Guangxi and Yunnan in China. For the comparability between them,theywere considered as the same species C. micholitzii by many academicians. The cpDNA sequences from 11 populations showed that these very controversial species, C. micholitzii and C. bifida, is paraphyletic and should belong to the same species C. micholitzii. AMOVA analysis showed that the component of among-population within region/species (76.46%) was unexpectedly larger than the among-species/region component (14.97%), which also indicates that there is no justification for recognizing two species as C. micholitzii and C. bifida. This hypothesis was also supported by the geological data, especially the neotectonic history of the indo-china block, which started to move south since Oligocene and cause the geographic isolation of these two groups. Therefore, the most likely explanation to the phenotypic similarities between these two groups may be the retention of ancestral polymorphisms in the paraphyletic group due to incomplete lineage sorting. Furthermore, the similarities may also be ascribed to pollen-mediated gene flow among geographically proximate populations and/or phenotypic convergence under similar selection schemes in the same region. C.micholitzi had the higest genetic diversity (HT = 0.980,) and genetic differentiation (GST = 0.830, NST = 0.915) among the C. micholitzii complex. The high genetic diversity might be attributed to its long evolutionary history, highly diverse habitats. The ineffective mode of seed dispersal and dramatic neotectonic movement in the distribution range of this species could result in the high genetic differentiation. 2. Phylogeographic analysis based on nuclear ribosomal sequences, We sequenced the nrDNA ITS in all 27 populations sampled, 7 haplotypes were identified, among which C. micholitzii had 6, while C. multipinnata, C. longipetiolula and C. debaoensis shared the remaining one. Compared to chloroplast genes, nuclear genes had higher correlation between genetic and geographical distance, but lower interspecies differentiation (54.42% vs 25.24%). Phylogeographical structure of C. micholitzii and C.bifida based on ITS Variation was consistent with the morphology differentiation. This similar in nuclear gene should be ascribed to pollen-mediated gene flow among geographically proximate populations.Long-distance gene flow over the two groups was clearly interrupted, which brought on the nrDNA genetic differenciation between the geographically isolated groups, to a certain extent affected the morphological variation. 3. Interspecies relationships among Cycas micholitzii complex, We analysed chloroplast sequence variation of the atpB-rbcL and psbA-trnH intergenic spacers in 27 populations sampled of C. micholitzii complex, AMOVA analysis showed that the component of among-species/region component (59.21%). However, phylogenic analysis showed that the haplotypes of C. micholitzii complex couldn`t grouped into four clusters closely corresponding to the narrowly defined C. micholitzi, C. multipinnata, C. debaoensis and C. longipetiolula. We concluded that the conflict may result from several factors: firstly incomplete lineage sorting of C. micholitzii; secondly hybridization/introgression of sympatrically cycads, which would be supported by evidence base on nrDNA ITS sequences; thirdly intramolecular recombination in cpDNA of cycads; eventually the neotectonic movement in the distribution range of this species.","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3ACycas%5C+micholitzii%5C+complex%5C+is%5C+composed%5C+of%5C+5%5C+species%5C%3A%5C+C.%5C+micholitzii%5C+Dyer%2C%5C+C.%5C+bifida%5C+%5C%28Dyer%5C%29%5C+K.%5C+D.%5C+Hill%2CC.%5C+longipetiolula%5C+D.%5C+Y.%5C+Wang%2C%5C+C.%5C+debaoensis%5C+Y.%5C+C.%5C+Zhong%5C+et%5C+C%5C+J.%5C+Chen%2C%5C+C.%5C+multipinnata%5C+C%5C+J.%5C+Chen%5C+et%5C+S.%5C+Y.%5C+Yang%EF%BC%8Cand%5C+distributed%5C+from%5C+southwest%5C+China%5C+to%5C+central%5C+Vietnam%5C+and%5C+eastern%5C+Laos.%5C+Based%5C+on%5C+sequence%5C+data%5C+from%5C+two%5C+maternally%5C+inherited%5C+cpDNA%5C+and%5C+one%5C+biparentally%5C+nuclear%5C+DNA%5C+fragments%2C%5C+our%5C+study%5C+revealed%5C+the%5C+population%5C+genetic%5C+structure%5C+of%5C+C.%5C+micholitzii%5C+complex%5C+and%5C+explored%5C+the%5C+potential%5C+causes.%5C+The%5C+evolutionary%5C+and%5C+demographic%5C+histories%5C+were%5C+investigated.%5C+The%5C+genetic%5C+relationship%5C+among%5C+species%5C+in%5C+the%5C+complex%5C+was%5C+also%5C+clarified.The%5C+results%5C+were%5C+summarized%5C+as%5C+follows%5C%3A%5C+1.%5C+Phylogeographic%5C+analysis%5C+based%5C+on%5C+chloroplast%5C+sequences%EF%BC%8CWe%5C+examined%5C+chloroplast%5C+sequence%5C+variation%5C+of%5C+the%5C+atpB%5C-rbcLand%5C+psbA%5C-trnHintergenic%5C+spacers%5C+in%5C+27%5C+populations%5C+of%5C+C.%5C+micholitzii%5C+complex%2C%5C+recovering%5C+26%5C+haplotypes.%5C+The%5C+average%5C+within%5C-population%5C+diversity%5C+%5C%28HS%5C+%3D%5C+0.140%5C%29%5C+was%5C+low%5C+while%5C+total%5C+diversity%5C+%5C%28HT%5C+%3D%5C+0.911%5C%29%5C+was%5C+high.%5C+Population%5C+differentiation%5C+was%5C+also%5C+high%5C%28GST%5C+%3D%5C+0.846%2C%5C+NST%5C+%3D%5C+0.919%5C%29%2C%5C+indicating%5C+significant%5C+phylogeographical%5C+structure%5C+%5C%28NST%5C+%3E%5C+GST%2Cp%5C+%3C%5C+0.001%5C%29%5C+and%5C+low%5C+levels%5C+of%5C+seed%5C-based%5C+gene%5C+flow.%5C+C.%5C+debaoensis%5C+%5C%28Cycadaceae%5C%29%5C+is%5C+an%5C+endangered%5C+species%5C+restricted%5C+to%5C+the%5C+border%5C+of%5C+Guangxi%5C+and%5C+Yunnan%5C+province%5C+in%5C+southwest%5C+China.%5C+This%5C+species%5C+has%5C+been%5C+classified%5C+into%5C+two%5C+types%5C%3A%5C+sand%5C+and%5C+karst%2C%5C+according%5C+to%5C+the%5C+soil%5C+matrix%5C+they%5C+grow%5C+on.%5C+We%5C+examined%5C+chloroplast%5C+sequence%5C+variation%5C+of%5C+the%5C+cpDNA%5C+sequences%5C+from%5C+11%5C+populations%5C+of%5C+this%5C+species.%5C+Significant%5C+population%5C+genetic%5C+differentiation%5C+was%5C+detected%5C+%5C%28GST%3D%5C+0.684%5C+and%5C+FST%5C+%3D%5C+0.74160%5C%29.%5C+There%5C+was%5C+marked%5C+genetic%5C+differentiation%5C+between%5C+populations%5C+in%5C+the%5C+sand%5C+and%5C+karst%5C+regions%5C+and%5C+no%5C+expansion%5C+was%5C+detected.%5C+Climate%5C+changes%5C+during%5C+glacial%5C+periods%5C+have%5C+had%5C+significant%5C+effects%5C+on%5C+the%5C+current%5C+distribution%5C+of%5C+cycads.%5C+The%5C+molecular%5C+phylogenetic%5C+data%2C%5C+together%5C+with%5C+the%5C+geographic%5C+distribution%5C+of%5C+the%5C+haplotypes%2C%5C+suggest%5C+that%5C+C.%5C+debaoensis%5C+experienced%5C+range%5C+contraction%5C+during%5C+glacial%5C+periods%2C%5C+and%5C+that%5C+the%5C+current%5C+populations%5C+are%5C+still%5C+confined%5C+to%5C+the%5C+original%5C+refugia%5C+in%5C+southwest%5C+China%5C+which%5C+have%5C+favorable%5C+habitats%5C+in%5C+glacial%5C+period.%5C+These%5C+results%5C+imply%5C+that%5C+small%5C+refugia%5C+were%5C+maintained%5C+in%5C+both%5C+sand%5C+and%5C+karst%5C+regions%5C+during%5C+the%5C+LGM%5C+%5C%28last%5C+glacial%5C+maximum%5C%29.%5C+This%5C+species%5C+had%5C+no%5C+postglacial%5C+recolonization%5C+and%5C+only%5C+stayed%5C+in%5C+these%5C+refugia%5C+up%5C+to%5C+now.%5C+The%5C+low%5C+within%5C-population%5C+diversity%5C+of%5C+C.%5C+debaoensis%5C+suggests%5C+that%5C+there%5C+were%5C+strong%5C+bottleneck%5C+events%5C+or%5C+founder%5C+effects%5C+within%5C+each%5C+separate%5C+region%5C+during%5C+the%5C+Quaternary%5C+climatic%5C+oscillations.%5C+Relatively%5C+high%5C+genetic%5C+and%5C+haplotype%5C+diversities%5C+were%5C+detected%5C+in%5C+the%5C+newly%5C+discovered%5C+populations%2C%5C+which%5C+located%5C+at%5C+intermediate%5C+locality%5C+of%5C+sand%5C+regions%5C+and%5C+had%5C+morphological%5C+variation%5C%3B%5C+this%5C+is%5C+probably%5C+the%5C+consequence%5C+of%5C+the%5C+admixture%5C+of%5C+different%5C+haplotypes%5C+colonizing%5C+the%5C+area%5C+from%5C+separate%5C+sources.%5C+%5C+C.%5C+micholitzii%5C+occurs%5C+in%5C+the%5C+Annan%5C+Highlands%5C+in%5C+central%5C+Vietnam%5C+near%5C+the%5C+Laos%5C+border.%5C+C.%5C+bifida%5C+occurs%5C+in%5C+North%5C+Vietnam%5C%3B%5C+its%5C+distribution%5C+extends%5C+across%5C+the%5C+border%5C+into%5C+adjacent%5C+localities%5C+in%5C+Guangxi%5C+and%5C+Yunnan%5C+in%5C+China.%5C+For%5C+the%5C+comparability%5C+between%5C+them%2Ctheywere%5C+considered%5C+as%5C+the%5C+same%5C+species%5C+C.%5C+micholitzii%5C+by%5C+many%5C+academicians.%5C+The%5C+cpDNA%5C+sequences%5C+from%5C+11%5C+populations%5C+showed%5C+that%5C+these%5C+very%5C+controversial%5C+species%2C%5C+C.%5C+micholitzii%5C+and%5C+C.%5C+bifida%2C%5C+is%5C+paraphyletic%5C+and%5C+should%5C+belong%5C+to%5C+the%5C+same%5C+species%5C+C.%5C+micholitzii.%5C+AMOVA%5C+analysis%5C+showed%5C+that%5C+the%5C+component%5C+of%5C+among%5C-population%5C+within%5C+region%5C%2Fspecies%5C+%5C%2876.46%25%5C%29%5C+was%5C+unexpectedly%5C+larger%5C+than%5C+the%5C+among%5C-species%5C%2Fregion%5C+component%5C+%5C%2814.97%25%5C%29%2C%5C+which%5C+also%5C+indicates%5C+that%5C+there%5C+is%5C+no%5C+justification%5C+for%5C+recognizing%5C+two%5C+species%5C+as%5C+C.%5C+micholitzii%5C+and%5C+C.%5C+bifida.%5C+This%5C+hypothesis%5C+was%5C+also%5C+supported%5C+by%5C+the%5C+geological%5C+data%2C%5C+especially%5C+the%5C+neotectonic%5C+history%5C+of%5C+the%5C+indo%5C-china%5C+block%2C%5C+which%5C+started%5C+to%5C+move%5C+south%5C+since%5C+Oligocene%5C+and%5C+cause%5C+the%5C+geographic%5C+isolation%5C+of%5C+these%5C+two%5C+groups.%5C+Therefore%2C%5C+the%5C+most%5C+likely%5C+explanation%5C+to%5C+the%5C+phenotypic%5C+similarities%5C+between%5C+these%5C+two%5C+groups%5C+may%5C+be%5C+the%5C+retention%5C+of%5C+ancestral%5C+polymorphisms%5C+in%5C+the%5C+paraphyletic%5C+group%5C+due%5C+to%5C+incomplete%5C+lineage%5C+sorting.%5C+Furthermore%2C%5C+the%5C+similarities%5C+may%5C+also%5C+be%5C+ascribed%5C+to%5C+pollen%5C-mediated%5C+gene%5C+flow%5C+among%5C+geographically%5C+proximate%5C+populations%5C+and%5C%2For%5C+phenotypic%5C+convergence%5C+under%5C+similar%5C+selection%5C+schemes%5C+in%5C+the%5C+same%5C+region.%5C+C.micholitzi%5C+had%5C+the%5C+higest%5C+genetic%5C+diversity%5C+%5C%28HT%5C+%3D%5C+0.980%2C%5C%29%5C+and%5C+genetic%5C+differentiation%5C+%5C%28GST%5C+%3D%5C+0.830%2C%5C+NST%5C+%3D%5C+0.915%5C%29%5C+among%5C+the%5C+C.%5C+micholitzii%5C+complex.%5C+The%5C+high%5C+genetic%5C+diversity%5C+might%5C+be%5C+attributed%5C+to%5C+its%5C+long%5C+evolutionary%5C+history%2C%5C+highly%5C+diverse%5C+habitats.%5C+The%5C+ineffective%5C+mode%5C+of%5C+seed%5C+dispersal%5C+and%5C+dramatic%5C+neotectonic%5C+movement%5C+in%5C+the%5C+distribution%5C+range%5C+of%5C+this%5C+species%5C+could%5C+result%5C+in%5C+the%5C+high%5C+genetic%5C+differentiation.%5C+2.%5C+Phylogeographic%5C+analysis%5C+based%5C+on%5C+nuclear%5C+ribosomal%5C+sequences%2C%5C+We%5C+sequenced%5C+the%5C+nrDNA%5C+ITS%5C+in%5C+all%5C+27%5C+populations%5C+sampled%2C%5C+7%5C+haplotypes%5C+were%5C+identified%2C%5C+among%5C+which%5C+C.%5C+micholitzii%5C+had%5C+6%2C%5C+while%5C+C.%5C+multipinnata%2C%5C+C.%5C+longipetiolula%5C+and%5C+C.%5C+debaoensis%5C+shared%5C+the%5C+remaining%5C+one.%5C+Compared%5C+to%5C+chloroplast%5C+genes%2C%5C+nuclear%5C+genes%5C+had%5C+higher%5C+correlation%5C+between%5C+genetic%5C+and%5C+geographical%5C+distance%2C%5C+but%5C+lower%5C+interspecies%5C+differentiation%5C+%5C%2854.42%25%5C+vs%5C+25.24%25%5C%29.%5C+Phylogeographical%5C+structure%5C+of%5C+C.%5C+micholitzii%5C+and%5C+C.bifida%5C+based%5C+on%5C+ITS%5C+Variation%5C+was%5C+consistent%5C+with%5C+the%5C+morphology%5C+differentiation.%5C+This%5C+similar%5C+in%5C+nuclear%5C+gene%5C+should%5C+be%5C+ascribed%5C+to%5C+pollen%5C-mediated%5C+gene%5C+flow%5C+among%5C+geographically%5C+proximate%5C+populations.Long%5C-distance%5C+gene%5C+flow%5C+over%5C+the%5C+two%5C+groups%5C+was%5C+clearly%5C+interrupted%2C%5C+which%5C+brought%5C+on%5C+the%5C+nrDNA%5C+genetic%5C+differenciation%5C+between%5C+the%5C+geographically%5C+isolated%5C+groups%2C%5C+to%5C+a%5C+certain%5C+extent%5C+affected%5C+the%5C+morphological%5C+variation.%5C+3.%5C+Interspecies%5C+relationships%5C+among%5C+Cycas%5C+micholitzii%5C+complex%2C%5C+We%5C+analysed%5C+chloroplast%5C+sequence%5C+variation%5C+of%5C+the%5C+atpB%5C-rbcL%5C+and%5C+psbA%5C-trnH%5C+intergenic%5C+spacers%5C+in%5C+27%5C+populations%5C+sampled%5C+of%5C+C.%5C+micholitzii%5C+complex%2C%5C+AMOVA%5C+analysis%5C+showed%5C+that%5C+the%5C+component%5C+of%5C+among%5C-species%5C%2Fregion%5C+component%5C+%5C%2859.21%25%5C%29.%5C+However%2C%5C+phylogenic%5C+analysis%5C+showed%5C+that%5C+the%5C+haplotypes%5C+of%5C+C.%5C+micholitzii%5C+complex%5C+couldn%60t%5C+grouped%5C+into%5C+four%5C+clusters%5C+closely%5C+corresponding%5C+to%5C+the%5C+narrowly%5C+defined%5C+C.%5C+micholitzi%2C%5C+C.%5C+multipinnata%2C%5C+C.%5C+debaoensis%5C+and%5C+C.%5C+longipetiolula.%5C+We%5C+concluded%5C+that%5C+the%5C+conflict%5C+may%5C+result%5C+from%5C+several%5C+factors%5C%3A%5C+firstly%5C+incomplete%5C+lineage%5C+sorting%5C+of%5C+C.%5C+micholitzii%5C%3B%5C+secondly%5C+hybridization%5C%2Fintrogression%5C+of%5C+sympatrically%5C+cycads%2C%5C+which%5C+would%5C+be%5C+supported%5C+by%5C+evidence%5C+base%5C+on%5C+nrDNA%5C+ITS%5C+sequences%5C%3B%5C+thirdly%5C+intramolecular%5C+recombination%5C+in%5C+cpDNA%5C+of%5C+cycads%5C%3B%5C+eventually%5C+the%5C+neotectonic%5C+movement%5C+in%5C+the%5C+distribution%5C+range%5C+of%5C+this%5C+species."},{"jsname":"Federal Ministry for Economic Cooperation and Development, Germany[13.1432.7-001.00]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3AFederal%5C+Ministry%5C+for%5C+Economic%5C+Cooperation%5C+and%5C+Development%2C%5C+Germany%5C%5B13.1432.7%5C-001.00%5C%5D"},{"jsname":"Following the rapid uplift of the Himalaya, the reorganization of the major river drainages was primarily caused by river capture events，e.g. those of the Jinshajiang River (comprising the Upper, Middle and Lower Jinshajiang) and its tributaries (Yalongjiang, Daduhe, Jialingjiang), the Nujiang, the Lancangjiang, and the Honghe. We selected Terminalia franchetii var. franchetii and T. franchetii var. intricata in the Sino-Himalayan region to study the relationship with Honghe diversion events. The distribution of this species is predicted to have retained genetic signatures of past hydrological landscape structures. The major result as flowing:1. Chloroplast phylogeography of T. franchetii based on haplotype analysis，Based on a range-wide sampling comprising 28 populations and 258 individuals, and using chloroplast DNA sequences (trnL-trnF, petL-psbE), we detected 12 haplotypes. Terminalia franchetii was found to harbour high haplotype diversity (hT = 0.784) but low average within-population diversity (hS = 0.124). The analysis of genetic structure using SAMOVA showed that the number of population groups equaled five, and all the haplotypes can be divided into five groups. Group B and C identified exhibited a disjunctive distribution of dominant haplotypes between northern and southern valleys, corresponding to the geography of past rather than modern drainage systems.Mismatch distribution (multimodal curve) and neutral tests provided no evidence of recent demographic population growth. We suggest that the modern disjunctive distribution of T. franchetii, and associated patterns of cpDNA haplotype variation, result from vicariance caused by several historical river separation and capture events. By assuming a common mutation rate of the cpDNA-IGS regions, our inferred timings of these events (0.82-4.39 Mya) broadly agrees with both previous geological and molecular estimated time of drainage rearrangements in this region. So we conclude that there were several historical vicariance events play a major role for the distribution of T. franchetii in this region.2. Genetic diversity and structure of T. franchetii var. franchetii based on AFLP analysis，We determined the genotype of 251 individuals of T. franchetii var. franchetii from 21 populations using amplified fragment length polymorphism (AFLP), for our aim is only investigated the relationship between the modern distribution of T. franchetii and geological changes in drainage patterns. The overall estimate of genetic structure (Gst) was 0.249, indicating that clear genetic differentiation existed among the populations. Estimates of gene flow (Nm = 0.754) between populations based on the Gst value revealed that the number of migrants per generation is not frequently.Using Neighbor-Joining tree, Principal Coordinates Analysis, STRUCTURE and network methods, Analyses of AFLP markers identified two main population groups (I and II) and four subgroups (A – D) of T. franchetii. Genetic diversity was lower in Group I than in Group II. The results show that Groups I and II probably once occupied continuous areas respectively along ancient drainage systems and there were several historical separation and capture events that can account for the distribution of T. franchetii in this region. After all，these are good examples of the way in which historical events can change a species’ distribution from continuous to fragmented (Jinshajiang/ Yalongjiang and Honghe), and a disjunct distribution to a continuous one (Upper/Lower Jinshajiang and Yalongjiang). The results provide new insights into the phylogeographic pattern of plants in southwest China.3. Relationships between T. franchetii var. franchetii and T. franchetii var. intricata ，While T. franchetii var. Franchetii and var. intricata slightly differ in overall size and leaf hairiness, these taxa did not exhibit reciprocal monophyly. As results show, the genetic difference between the two varieties is much smaller than that within var. franchetii (Salween population vs. other populationsof this variety). It is also revealed in a phylogenetic analysis of ITS region of Combretoideae. The habitats of var. franchetii and var. intricata have obviously difference. Thus, the differences between the two varieties in overall size and leaf hairiness might reflect different phenotypic responses to environmental changes and the divergent environmental niche spaces they occupy. Based on the reasoning above, we agree with Flora of China that “T. intricata” represents a variety of T. franchetii rather than a separate species.","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3AFollowing%5C+the%5C+rapid%5C+uplift%5C+of%5C+the%5C+Himalaya%2C%5C+the%5C+reorganization%5C+of%5C+the%5C+major%5C+river%5C+drainages%5C+was%5C+primarily%5C+caused%5C+by%5C+river%5C+capture%5C+events%EF%BC%8Ce.g.%5C+those%5C+of%5C+the%5C+Jinshajiang%5C+River%5C+%5C%28comprising%5C+the%5C+Upper%2C%5C+Middle%5C+and%5C+Lower%5C+Jinshajiang%5C%29%5C+and%5C+its%5C+tributaries%5C+%5C%28Yalongjiang%2C%5C+Daduhe%2C%5C+Jialingjiang%5C%29%2C%5C+the%5C+Nujiang%2C%5C+the%5C+Lancangjiang%2C%5C+and%5C+the%5C+Honghe.%5C+We%5C+selected%5C+Terminalia%5C+franchetii%5C+var.%5C+franchetii%5C+and%5C+T.%5C+franchetii%5C+var.%5C+intricata%5C+in%5C+the%5C+Sino%5C-Himalayan%5C+region%5C+to%5C+study%5C+the%5C+relationship%5C+with%5C+Honghe%5C+diversion%5C+events.%5C+The%5C+distribution%5C+of%5C+this%5C+species%5C+is%5C+predicted%5C+to%5C+have%5C+retained%5C+genetic%5C+signatures%5C+of%5C+past%5C+hydrological%5C+landscape%5C+structures.%5C+The%5C+major%5C+result%5C+as%5C+flowing%5C%3A1.%5C+Chloroplast%5C+phylogeography%5C+of%5C+T.%5C+franchetii%5C+based%5C+on%5C+haplotype%5C+analysis%EF%BC%8CBased%5C+on%5C+a%5C+range%5C-wide%5C+sampling%5C+comprising%5C+28%5C+populations%5C+and%5C+258%5C+individuals%2C%5C+and%5C+using%5C+chloroplast%5C+DNA%5C+sequences%5C+%5C%28trnL%5C-trnF%2C%5C+petL%5C-psbE%5C%29%2C%5C+we%5C+detected%5C+12%5C+haplotypes.%5C+Terminalia%5C+franchetii%5C+was%5C+found%5C+to%5C+harbour%5C+high%5C+haplotype%5C+diversity%5C+%5C%28hT%5C+%3D%5C+0.784%5C%29%5C+but%5C+low%5C+average%5C+within%5C-population%5C+diversity%5C+%5C%28hS%5C+%3D%5C+0.124%5C%29.%5C+The%5C+analysis%5C+of%5C+genetic%5C+structure%5C+using%5C+SAMOVA%5C+showed%5C+that%5C+the%5C+number%5C+of%5C+population%5C+groups%5C+equaled%5C+five%2C%5C+and%5C+all%5C+the%5C+haplotypes%5C+can%5C+be%5C+divided%5C+into%5C+five%5C+groups.%5C+Group%5C+B%5C+and%5C+C%5C+identified%5C+exhibited%5C+a%5C+disjunctive%5C+distribution%5C+of%5C+dominant%5C+haplotypes%5C+between%5C+northern%5C+and%5C+southern%5C+valleys%2C%5C+corresponding%5C+to%5C+the%5C+geography%5C+of%5C+past%5C+rather%5C+than%5C+modern%5C+drainage%5C+systems.Mismatch%5C+distribution%5C+%5C%28multimodal%5C+curve%5C%29%5C+and%5C+neutral%5C+tests%5C+provided%5C+no%5C+evidence%5C+of%5C+recent%5C+demographic%5C+population%5C+growth.%5C+We%5C+suggest%5C+that%5C+the%5C+modern%5C+disjunctive%5C+distribution%5C+of%5C+T.%5C+franchetii%2C%5C+and%5C+associated%5C+patterns%5C+of%5C+cpDNA%5C+haplotype%5C+variation%2C%5C+result%5C+from%5C+vicariance%5C+caused%5C+by%5C+several%5C+historical%5C+river%5C+separation%5C+and%5C+capture%5C+events.%5C+By%5C+assuming%5C+a%5C+common%5C+mutation%5C+rate%5C+of%5C+the%5C+cpDNA%5C-IGS%5C+regions%2C%5C+our%5C+inferred%5C+timings%5C+of%5C+these%5C+events%5C+%5C%280.82%5C-4.39%5C+Mya%5C%29%5C+broadly%5C+agrees%5C+with%5C+both%5C+previous%5C+geological%5C+and%5C+molecular%5C+estimated%5C+time%5C+of%5C+drainage%5C+rearrangements%5C+in%5C+this%5C+region.%5C+So%5C+we%5C+conclude%5C+that%5C+there%5C+were%5C+several%5C+historical%5C+vicariance%5C+events%5C+play%5C+a%5C+major%5C+role%5C+for%5C+the%5C+distribution%5C+of%5C+T.%5C+franchetii%5C+in%5C+this%5C+region.2.%5C+Genetic%5C+diversity%5C+and%5C+structure%5C+of%5C+T.%5C+franchetii%5C+var.%5C+franchetii%5C+based%5C+on%5C+AFLP%5C+analysis%EF%BC%8CWe%5C+determined%5C+the%5C+genotype%5C+of%5C+251%5C+individuals%5C+of%5C+T.%5C+franchetii%5C+var.%5C+franchetii%5C+from%5C+21%5C+populations%5C+using%5C+amplified%5C+fragment%5C+length%5C+polymorphism%5C+%5C%28AFLP%5C%29%2C%5C+for%5C+our%5C+aim%5C+is%5C+only%5C+investigated%5C+the%5C+relationship%5C+between%5C+the%5C+modern%5C+distribution%5C+of%5C+T.%5C+franchetii%5C+and%5C+geological%5C+changes%5C+in%5C+drainage%5C+patterns.%5C+The%5C+overall%5C+estimate%5C+of%5C+genetic%5C+structure%5C+%5C%28Gst%5C%29%5C+was%5C+0.249%2C%5C+indicating%5C+that%5C+clear%5C+genetic%5C+differentiation%5C+existed%5C+among%5C+the%5C+populations.%5C+Estimates%5C+of%5C+gene%5C+flow%5C+%5C%28Nm%5C+%3D%5C+0.754%5C%29%5C+between%5C+populations%5C+based%5C+on%5C+the%5C+Gst%5C+value%5C+revealed%5C+that%5C+the%5C+number%5C+of%5C+migrants%5C+per%5C+generation%5C+is%5C+not%5C+frequently.Using%5C+Neighbor%5C-Joining%5C+tree%2C%5C+Principal%5C+Coordinates%5C+Analysis%2C%5C+STRUCTURE%5C+and%5C+network%5C+methods%2C%5C+Analyses%5C+of%5C+AFLP%5C+markers%5C+identified%5C+two%5C+main%5C+population%5C+groups%5C+%5C%28I%5C+and%5C+II%5C%29%5C+and%5C+four%5C+subgroups%5C+%5C%28A%5C+%E2%80%93%5C+D%5C%29%5C+of%5C+T.%5C+franchetii.%5C+Genetic%5C+diversity%5C+was%5C+lower%5C+in%5C+Group%5C+I%5C+than%5C+in%5C+Group%5C+II.%5C+The%5C+results%5C+show%5C+that%5C+Groups%5C+I%5C+and%5C+II%5C+probably%5C+once%5C+occupied%5C+continuous%5C+areas%5C+respectively%5C+along%5C+ancient%5C+drainage%5C+systems%5C+and%5C+there%5C+were%5C+several%5C+historical%5C+separation%5C+and%5C+capture%5C+events%5C+that%5C+can%5C+account%5C+for%5C+the%5C+distribution%5C+of%5C+T.%5C+franchetii%5C+in%5C+this%5C+region.%5C+After%5C+all%EF%BC%8Cthese%5C+are%5C+good%5C+examples%5C+of%5C+the%5C+way%5C+in%5C+which%5C+historical%5C+events%5C+can%5C+change%5C+a%5C+species%E2%80%99%5C+distribution%5C+from%5C+continuous%5C+to%5C+fragmented%5C+%5C%28Jinshajiang%5C%2F%5C+Yalongjiang%5C+and%5C+Honghe%5C%29%2C%5C+and%5C+a%5C+disjunct%5C+distribution%5C+to%5C+a%5C+continuous%5C+one%5C+%5C%28Upper%5C%2FLower%5C+Jinshajiang%5C+and%5C+Yalongjiang%5C%29.%5C+The%5C+results%5C+provide%5C+new%5C+insights%5C+into%5C+the%5C+phylogeographic%5C+pattern%5C+of%5C+plants%5C+in%5C+southwest%5C+China.3.%5C+Relationships%5C+between%5C+T.%5C+franchetii%5C+var.%5C+franchetii%5C+and%5C+T.%5C+franchetii%5C+var.%5C+intricata%5C+%EF%BC%8CWhile%5C+T.%5C+franchetii%5C+var.%5C+Franchetii%5C+and%5C+var.%5C+intricata%5C+slightly%5C+differ%5C+in%5C+overall%5C+size%5C+and%5C+leaf%5C+hairiness%2C%5C+these%5C+taxa%5C+did%5C+not%5C+exhibit%5C+reciprocal%5C+monophyly.%5C+As%5C+results%5C+show%2C%5C+the%5C+genetic%5C+difference%5C+between%5C+the%5C+two%5C+varieties%5C+is%5C+much%5C+smaller%5C+than%5C+that%5C+within%5C+var.%5C+franchetii%5C+%5C%28Salween%5C+population%5C+vs.%5C+other%5C+populationsof%5C+this%5C+variety%5C%29.%5C+It%5C+is%5C+also%5C+revealed%5C+in%5C+a%5C+phylogenetic%5C+analysis%5C+of%5C+ITS%5C+region%5C+of%5C+Combretoideae.%5C+The%5C+habitats%5C+of%5C+var.%5C+franchetii%5C+and%5C+var.%5C+intricata%5C+have%5C+obviously%5C+difference.%5C+Thus%2C%5C+the%5C+differences%5C+between%5C+the%5C+two%5C+varieties%5C+in%5C+overall%5C+size%5C+and%5C+leaf%5C+hairiness%5C+might%5C+reflect%5C+different%5C+phenotypic%5C+responses%5C+to%5C+environmental%5C+changes%5C+and%5C+the%5C+divergent%5C+environmental%5C+niche%5C+spaces%5C+they%5C+occupy.%5C+Based%5C+on%5C+the%5C+reasoning%5C+above%2C%5C+we%5C+agree%5C+with%5C+Flora%5C+of%5C+China%5C+that%5C+%E2%80%9CT.%5C+intricata%E2%80%9D%5C+represents%5C+a%5C+variety%5C+of%5C+T.%5C+franchetii%5C+rather%5C+than%5C+a%5C+separate%5C+species."},{"jsname":"Friends of the Royal Botanic Gardens Victoria","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3AFriends%5C+of%5C+the%5C+Royal%5C+Botanic%5C+Gardens%5C+Victoria"},{"jsname":"Fundamental Research Funds for the Chinese Academy of Sciences'' Frontier Science Key Project[QYZDY-SSWSMC014]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3AFundamental%5C+Research%5C+Funds%5C+for%5C+the%5C+Chinese%5C+Academy%5C+of%5C+Sciences%27%27%5C+Frontier%5C+Science%5C+Key%5C+Project%5C%5BQYZDY%5C-SSWSMC014%5C%5D"},{"jsname":"Innovation Program of the Chinese Academy of Sciences[KSCX2-YW-Z-0926]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3AInnovation%5C+Program%5C+of%5C+the%5C+Chinese%5C+Academy%5C+of%5C+Sciences%5C%5BKSCX2%5C-YW%5C-Z%5C-0926%5C%5D"},{"jsname":"Japan Society for the Promotion of Science[1264402271]","jscount":"1","jsurl":"/simple-search?field1=all&field=dc.project.title_filter&advanced=false&query1=Phylogeny%2BEstimation&&fq=dc.project.title_filter%3AJapan%5C+Society%5C+for%5C+the%5C+Promotion%5C+of%5C+Science%5C%5B1264402271%5C%5D"},{"jsname":"lastIndexed","jscount":"2024-04-25"}],"资助项目","dc.project.title_filter")'>
Applied an... [1]
Applied an... [1]
Biosystems... [1]
CAPES/Pro-... [1]
CAS Light ... [1]
CAS Presid... [1]
更多...
收录类别
SCI [353]
CSCD [4]
SSCI [1]
资助机构
Chinese Ac... [8]
John D. an... [7]
National N... [6]
National K... [5]
Talent Pro... [5]
31590823) [4]
更多...
×
知识图谱
KIB OpenIR
开始提交
已提交作品
待认领作品
已认领作品
未提交全文
收藏管理
QQ客服
官方微博
反馈留言
分面浏览：Funding Project
当前检索式
((ALL：Phylogeny Estimation))
限定条件
无
共63条，第1-20条
Applied and Fundamen
1
Applied and Fundamen
1
Biosystems and Integ
1
CAPES/Pro-Amazonia[5
1
CAS Light of West Ch
1
CAS President''s Int
1
CAS Southeast Asia B
1
CAS Strategic Priori
1
Chiang Mai Universit
1
Chinese Academy of S
1
Chinese Academy of S
1
Construction Program
1
Cyatheaceae species,
1
Cycas micholitzii co
1
Federal Ministry for
1
Following the rapid
1
Friends of the Royal
1
Fundamental Research
1
Innovation Program o
1
Japan Society for th
1
