Arabidopsis AGAMOUS-LIKE16 and SUPPRESSOR OF CONSTANS1 regulate the genome-wide expression and flowering time

doi:10.1093/plphys/kiad058

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	Arabidopsis AGAMOUS-LIKE16 and SUPPRESSOR OF CONSTANS1 regulate the genome-wide expression and flowering time
	Dong,Xue; Zhang,Li-Ping; Tang,Yin-Hua; Yu,Dongmei; Cheng,Fang; Dong,Yin-Xin; Jiang,Xiao-Dong; Qian,Fu-Ming; Guo,Zhen-Hua; Hu,Jin-Yong
	2023
发表期刊	PLANT PHYSIOLOGY
ISSN	1532-2548
卷号	192 期号:1 页码:154-169
摘要	Flowering transition is tightly coordinated by complex gene regulatory networks, in which AGAMOUS-KE 16 (AGL16) plays important roles. Here, we identified the molecular function and binding properties of AGL16 and demonstrated its partial dependency on the SUPPRESSOR OF CONSTANS 1 (SOC1) function in regulating flowering. AGL16 bound to promoters of more than 2,000 genes via CArG-box motifs with high similarity to that of SOC1 in Arabidopsis (Arabidopsis thaliana). Approximately 70 flowering genes involved in multiple pathways were potential targets of AGL16. AGL16 formed a protein complex with SOC1 and shared a common set of targets. Intriguingly, only a limited number of genes were differentially expressed in the agl16-1 loss-of-function mutant. However, in the soc1-2 knockout background, AGL16 repressed and activated the expression of 375 and 182 genes, respectively, with more than a quarter bound by AGL16. Corroborating these findings, AGL16 repressed the flowering time more strongly in soc1-2 than in the Col-0 background. These data identify a partial inter-dependency between AGL16 and SOC1 in regulating genome-wide gene expression and flowering time, while AGL16 provides a feedback regulation on SOC1 expression. Our study sheds light on the complex background dependency of AGL16 in flowering regulation, thus providing additional insights into the molecular coordination of development and environmental adaptation.
关键词	FLORAL TRANSITION SOC1 FLC MICRORNA PATHWAYS PROTEIN IDENTIFICATION CONTRIBUTES ANNOTATION DETERMINES
学科领域	Plant Sciences
DOI	10.1093/plphys/kiad058
WOS记录号	WOS:000931166300001
引用统计	被引频次：3[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/74900
专题	中国科学院昆明植物研究所
推荐引用方式 GB/T 7714	Dong,Xue,Zhang,Li-Ping,Tang,Yin-Hua,et al. Arabidopsis AGAMOUS-LIKE16 and SUPPRESSOR OF CONSTANS1 regulate the genome-wide expression and flowering time[J]. PLANT PHYSIOLOGY,2023,192(1):154-169.
APA	Dong,Xue.,Zhang,Li-Ping.,Tang,Yin-Hua.,Yu,Dongmei.,Cheng,Fang.,...&Hu,Jin-Yong.(2023).Arabidopsis AGAMOUS-LIKE16 and SUPPRESSOR OF CONSTANS1 regulate the genome-wide expression and flowering time.PLANT PHYSIOLOGY,192(1),154-169.
MLA	Dong,Xue,et al."Arabidopsis AGAMOUS-LIKE16 and SUPPRESSOR OF CONSTANS1 regulate the genome-wide expression and flowering time".PLANT PHYSIOLOGY 192.1(2023):154-169.

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