Knowledge Management System of Kunming Institute of Botany,CAS
| 青藏高原 葱属（ 石蒜科）基因组大小进化研究; Genome size evolution in Allium (Amaryllidaceae) from Qinghai-Tibetan Plateau | |
| 周宁 | |
| Thesis Advisor | 杨永平 |
| Abstract | Genome size is an important trait of plants and is highly variable among interspecies. However, variant patterns and driving factors are important problems in evolutionary biology. In plant, genome size is affected by ecological factor except its own. Furthermore, genome size closely correlates with phenotype, karyotype, and seed traits. Allium is a large genus of monocotyledons. There are about 971 species in the world, mainly distributed in the northern hemisphere. At present, the genus has been studied systematically. It is a monophyletic group with clear phylogenetic relationship and geographical distribution. There are at least 111 species of this genus in the Qinghai Tibetan Plateau, and the species diversity is rich and highly differentiated in this area Habitat diversity resulting from the uplift of the Qinghai - Tibetan plateau has promoted severely differentiation of Allium L.; moreover, karyotypic traits and phylogenetic relationship in Allium are clear. Therefore, Allium is an ideal model to study genome size evolution in Qinghai - Tibetan Plateau. In this study, we first reconstruct a phylogeny for Allium in the Qinghai-Tibetan Plateau. In the phylogenetic framework, we then analyze genome size and its relationships to karyotypic traits, seed traits (seed size and size mass), and ecological factors (altitude, mean annual temperature, mean annual precipitation, and phenology) to insight into model driving genome size evolution and relationship of environmental adaptation, as well as provide a value model of genome size evolution in Qinghai - Tibetan Plateau. The results are as follows: (1) The genome size of Allium in Qinghai - Tibetan Plateau was strongly variant, about 21.37 - fold (from 2.61 pg (A. rude) to 55.78 pg (A. cyathophorum var. farreri)). The genome size of the genus also varied greatly in different ploidy levels, and the diploid genome size varied about 7.59 - fold (from 7.35 pg (A. chrysocephalum; 2n = 16) to 55.78 pg (A. cyathophorum var. farreri; 2n = 16)), the mean genome size was 18.08 pg; the variation of triploid genome size was about 4.28-fold (from 5.69 pg (A. korolkowii; 2n = 24) to 24.34 pg (A. ovalifolium; 2n = 24)), and the average genome size was 13.21 pg; The tetraploid genome size variation was about 4.03-fold (from 4.20 pg (A. ramosum; 2n = 28) to 16.91 pg (A. bidentatum; 2n = 32)), the mean genome size was 9.62 pg; the variation of hexaploid genome size was about 2.54-fold (from 2.97 pg (A. fasciculatum; 2n = 42) to 7.55 pg (A. polyrrhizum; 2n = 54)), and the average genome size was 5.74 pg; octoploid has only one species (A. rude), with the smallest genome size of 2.61 pg. In addition, the genome size of Allium decreased with the increase of ploidy level. There was a significant positive correlation between genome size and chromosome length of Allium in Qinghai-Tibetan Plateau. Repeated sequences, heterochromatin and chromosome doubling fusion may be responsible for the variation of genome size in A |
| 2021-07 | |
| Document Type | 学位论文 |
| Identifier | http://ir.kib.ac.cn/handle/151853/74573 |
| Collection | 昆明植物所硕博研究生毕业学位论文 |
| Recommended Citation GB/T 7714 | 周宁. 青藏高原 葱属（ 石蒜科）基因组大小进化研究, Genome size evolution in Allium (Amaryllidaceae) from Qinghai-Tibetan Plateau[D],2021. |
| Files in This Item: | ||||||
| File Name/Size | DocType | Version | Access | License | ||
| 周宁-周宁_硕士毕业论文_青藏高原d1f（2614KB） | 学位论文 | 限制开放 | CC BY-NC-SA | Application Full Text | ||
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