Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China

doi:10.1080/23802359.2021.1973918

KIB OpenIR

	Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China
	Tang,Jinli ; Zhao,Bo ; Li,Cailin ; Hong,Xin
	2021
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
ISSN	2380-2359
卷号	6 期号:10 页码:2936-2938
摘要	Oreocharis cotinifolia is a plant herb with a small population and narrow distribution range in southeast China. It is listed as one of the class 1 key protected wild plants in China and designated as a critically endangered species. In this study, we assembled the complete chloroplast genome of O. cotinifolia using data from high-throughput Illumina sequencing. The cp genome is 153,577 bp in length and includes two inverted repeats (IRs) of 25,292 bp, separated by a large single-copy region (LSC) and a small single-copy region (SSC) that are 84,898 bp and 18,095 bp, respectively. The GC content is 37.42%. The genome encodes 128 functional genes, including 87 protein-coding, 37 tRNA, and 4 rRNA genes. Maximum likelihood analysis showed that O. cotinifolia is closely related to the congeneric O. mileensis. The complete chloroplast genome will contribute to further studies on phylogeny and conservation of O. cotinifolia and related taxa in Oreocharis of Gesneriaceae.
关键词	Chloroplast genome Endangered Oreocharis cotinifolia (Gesneriaceae) Phylogeny
DOI	10.1080/23802359.2021.1973918
WOS记录号	WOS:000696218200001
引用统计	被引频次：3[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/73644
专题	中国科学院昆明植物研究所
作者单位	1.Guilin Med Univ, Coll Pharm, Guilin, Peoples R China 2.Chinese Acad Sci, Kunming Inst Bot, Yunnan Key Lab Integrat Conservat Plant Species E, Kunming, Yunnan, Peoples R China 3.Guilin Tourism Univ, Sch Leisure & Hlth, Guilin, Peoples R China 4.Guangxi Zhuang Autonomous Reg & Chinese Acad Sci, Gesneriad Conservat Ctr China GCCC, Natl Gesneriaceae Germplasm Resources Bank GXIB, Gesneriad Comm China Wild Plant Conservat Assoc, Guilin, Peoples R China 5.Anhui Univ, Sch Resources & Environm Engn, Anhui Prov Engn Lab Wetland Ecosyst Protect & Res, Hefei, Anhui, Peoples R China
推荐引用方式 GB/T 7714	Tang,Jinli,Zhao,Bo,Li,Cailin,et al. Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2021,6(10):2936-2938.
APA	Tang,Jinli,Zhao,Bo,Li,Cailin,&Hong,Xin.(2021).Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China.MITOCHONDRIAL DNA PART B-RESOURCES,6(10),2936-2938.
MLA	Tang,Jinli,et al."Complete chloroplast genome sequence of an endangered plant Oreocharis cotinifolia (Gesneriaceae) from Guangxi, China".MITOCHONDRIAL DNA PART B-RESOURCES 6.10(2021):2936-2938.