DNA barcoding and phylogenetic relationships in Omphalogramma (Primulaceae) from the Hengduan Mountain region of China

doi:10.11646/phytotaxa.402.2.3

KIB OpenIR

	DNA barcoding and phylogenetic relationships in Omphalogramma (Primulaceae) from the Hengduan Mountain region of China
	Huang,Yuan; Chen,Xiong; Chen,Jiahui; Li,Zhimin
	2019
发表期刊	PHYTOTAXA
ISSN	1179-3155
卷号	402 期号:2 页码:97-106
摘要	Omphalogramma is a small genus with about 13 species and rather isolated distribution on high mountain range of the Himalayas. As the large degrees of similarity in morphological characters between species, it is difficult to distinguish closely related species in the genus. In this study, we used one nuclear ITS and other three chloroplast DNA markers (rbcL, matK, and trnH-psbA) to evaluate 39 accessions of Omphalogramma (Primulaceae) from the Hengduan Mountains, representing seven species. Our results showed that the discrimination power of the markers at the species level was 14.3% (rbcL), 28.4% (trnH-psbA), 42.9% (matK), and 100% (ITS). The mean value of genetic distance between species for ITS was more than 3-fold that of intraspecific distance; all species were distinguished. Species were differentiated by unique characters, and phylogenetic analysis showed that the Omphalogramma species formed two clear monophyletic clades comprising O. vinciflorum (bootstrapping: 96.8%) and remaining Omphalogramma species (bootstrapping: 97.5%). This study indicated that DNA barcoding is a useful technique in the phylogenetic and taxonomic description of Omphalogramma species.
DOI	10.11646/phytotaxa.402.2.3
收录类别	SCI
WOS记录号	WOS:000465412500003
引用统计	被引频次：2[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/71049
专题	中国科学院昆明植物研究所
推荐引用方式 GB/T 7714	Huang,Yuan,Chen,Xiong,Chen,Jiahui,et al. DNA barcoding and phylogenetic relationships in Omphalogramma (Primulaceae) from the Hengduan Mountain region of China[J]. PHYTOTAXA,2019,402(2):97-106.
APA	Huang,Yuan,Chen,Xiong,Chen,Jiahui,&Li,Zhimin.(2019).DNA barcoding and phylogenetic relationships in Omphalogramma (Primulaceae) from the Hengduan Mountain region of China.PHYTOTAXA,402(2),97-106.
MLA	Huang,Yuan,et al."DNA barcoding and phylogenetic relationships in Omphalogramma (Primulaceae) from the Hengduan Mountain region of China".PHYTOTAXA 402.2(2019):97-106.

条目包含的文件		下载所有文件
文件名称/大小	文献类型	版本类型	开放类型	使用许可
Huang-2019-DNA barco（1695KB）	期刊论文	出版稿	开放获取	CC BY-NC-SA	浏览下载