Sequencing and characterization of the complete chloroplast genome of Sorbaria arborea (Rosaceae)
Sun, Wenguang1,2; Chen, Zhe2; Lv, Zhenyu1,2; Li, Zhimin1
Corresponding AuthorLi, Zhimin(lizhimin_vip@163.com)
2020-01-02
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
Volume5Issue:1Pages:1090-1091
AbstractSorbaria arborea is a species which is endemic to China. We utilized next-generation Illumina sequencing technology to sequence and assemble its chloroplast genome. The 160,137 bp genome contained four main sections, including a pair of inverted repeat regions which were 26,332 bp in length, and a small single-copy region was 19,418 bp, as well as a large single-copy region, which was 88,055 bp. The genome had a GC content of 36.1% and contained 113 unique genes, including 4 rRNAs, 30 tRNAs, and 79 protein-coding genes. The phylogenetic relationship of 25 Rosaceae species was constructed based on their chloroplast genome sequences, which supported a close relationship between S. arborea and Amygdaloideae. This newly sequenced plastid genome provides useful information for assessing the genetic diversity and phylogenetic position of S. arborea.
KeywordSorbaria arborea C K Schneider chloroplast genome phylogenetic analysis
DOI10.1080/23802359.2020.1721359
Indexed BySCI ; SCI
Language英语
WOS IDWOS:000513154400001
Citation statistics
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/70850
Collection中国科学院东亚植物多样性与生物地理学重点实验室
Corresponding AuthorLi, Zhimin
Affiliation1.Yunnan Normal Univ, Sch Life Sci, Engn Res Ctr Sustainable Dev & Utilizat Biomass E, Kunming, Yunnan, Peoples R China
2.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Sun, Wenguang,Chen, Zhe,Lv, Zhenyu,et al. Sequencing and characterization of the complete chloroplast genome of Sorbaria arborea (Rosaceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(1):1090-1091.
APA Sun, Wenguang,Chen, Zhe,Lv, Zhenyu,&Li, Zhimin.(2020).Sequencing and characterization of the complete chloroplast genome of Sorbaria arborea (Rosaceae).MITOCHONDRIAL DNA PART B-RESOURCES,5(1),1090-1091.
MLA Sun, Wenguang,et al."Sequencing and characterization of the complete chloroplast genome of Sorbaria arborea (Rosaceae)".MITOCHONDRIAL DNA PART B-RESOURCES 5.1(2020):1090-1091.
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