The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum
Zhou, Jing1,2; Liu, Zhenwen3
Corresponding AuthorLiu, Zhenwen(liuzw@mail.kib.ac.cn)
2020-01-02
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
Volume5Issue:1Pages:1079-1080
AbstractCuminum cyminum (Apiaceae) is an economically important plant, whose fruits are usually used as flavoring, and also have pharmacological activities such as antioxidant, antibacterial, hypolipidemic, and so on. In this study, we assembled and annotated complete chloroplast (cp) genome sequence of C. cyminum. The results showed that the complete cp genome of C. cyminum was 157,839 bp in length, consisting of a large single-copy (LSC) region of 83,927bp, a small single-copy (SSC) region of 17,598bp, and two inverted repeat regions (IRa and IRb) of 28,157bp. In total, 131 genes were annotated, comprising of 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis indicated that C. cyminum belongs to the tribe Scandiceae, and showed close relationship with Daucus carota.
KeywordCuminum cyminum complete chloroplast genome phylogeny
DOI10.1080/23802359.2020.1722037
Indexed BySCI ; SCI
Language英语
WOS Research AreaGenetics & Heredity
WOS SubjectGenetics & Heredity
WOS IDWOS:000513157000001
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Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/70832
Collection中国科学院东亚植物多样性与生物地理学重点实验室
Corresponding AuthorLiu, Zhenwen
Affiliation1.Kunming Med Univ, Sch Pharmaceut Sci, Kunming, Yunnan, Peoples R China
2.Kunming Med Univ, Yunnan Key Lab Pharmacol Nat Prod, Kunming, Yunnan, Peoples R China
3.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Zhou, Jing,Liu, Zhenwen. The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2020,5(1):1079-1080.
APA Zhou, Jing,&Liu, Zhenwen.(2020).The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum.MITOCHONDRIAL DNA PART B-RESOURCES,5(1),1079-1080.
MLA Zhou, Jing,et al."The complete chloroplast genome and phylogenetic analysis of Cuminum cyminum".MITOCHONDRIAL DNA PART B-RESOURCES 5.1(2020):1079-1080.
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