Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot
Chen, Jia-hui1; Huang, Yuan2; Brachi, Benjamin3; Yun, Quan-zheng4; Zhang, Wei5,6,7; Lu, Wei7; Li, Hong-na4; Li, Wen-qing1; Sun, Xu-dong8,9; Wang, Guang-yan8,9; He, Jun9; Zhou, Zhuo1; Chen, Kai-yun1; Ji, Yun-heng1; Shi, Ming-ming1; Sun, Wen-guang1; Yang, Yong-ping8,9; Zhang, Ren-gang4; Abbott, Richard J.10; Sun, Hang1
Corresponding AuthorChen, Jia-hui(chenjh@mail.kib.ac.cn) ; Yang, Yong-ping(yangyp@mail.kib.ac.cn) ; Abbott, Richard J.(rja@st-andrews.ac.uk) ; Sun, Hang(sunhang@mail.kib.ac.cn)
2019-10-19
Source PublicationNATURE COMMUNICATIONS
ISSN2041-1723
Volume10Pages:12
AbstractThe Hengduan Mountains (HDM) biodiversity hotspot exhibits exceptional alpine plant diversity. Here, we investigate factors driving intraspecific divergence within a HDM alpine species Salix brachista (Cushion willow), a common component of subnival assemblages. We produce a high-quality genome assembly for this species and characterize its genetic diversity, population structure and pattern of evolution by resequencing individuals collected across its distribution. We detect population divergence that has been shaped by a landscape of isolated sky island-like habitats displaying strong environmental heterogeneity across elevational gradients, combined with population size fluctuations that have occurred since approximately the late Miocene. These factors are likely important drivers of intraspecific divergence within Cushion willow and possibly other alpine plants with a similar distribution. Since intraspecific divergence is often the first step toward speciation, the same factors can be important contributors to the high alpine species diversity in the HDM.
DOI10.1038/s41467-019-13128-y
Indexed BySCI ; SCI
Language英语
WOS Research AreaScience & Technology - Other Topics
WOS SubjectMultidisciplinary Sciences
WOS IDWOS:000497691000012
Citation statistics
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/70073
Collection中国科学院东亚植物多样性与生物地理学重点实验室
Corresponding AuthorChen, Jia-hui; Yang, Yong-ping; Abbott, Richard J.; Sun, Hang
Affiliation1.Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Yunnan, Peoples R China
2.Yunnan Normal Univ, Sch Life Sci, Kunming 650092, Yunnan, Peoples R China
3.Univ Bordeaux, INRA, BIOGECO, Cestas, France
4.Beijing Ori Gene Sci & Technol Co Ltd, Beijing 102206, Peoples R China
5.Peking Univ, State Key Lab Prot & Plant Gene Res, Peking Tsinghua Ctr Life Sci, Beijing 100871, Peoples R China
6.Peking Univ, Sch Life Sci, Beijing 100871, Peoples R China
7.Peking Univ, Sch Life Sci, Beijing 100871, Peoples R China
8.Chinese Acad Sci, Kunming Inst Bot, Inst Tibetan Plateau Res Kunming, Kunming 650201, Yunnan, Peoples R China
9.Chinese Acad Sci, Germplasm Bank Wild Species, Kunming Inst Bot, Kunming 650201, Yunnan, Peoples R China
10.Univ St Andrews, Sch Biol, St Andrews KY16 9TH, Fife, Scotland
Recommended Citation
GB/T 7714
Chen, Jia-hui,Huang, Yuan,Brachi, Benjamin,et al. Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot[J]. NATURE COMMUNICATIONS,2019,10:12.
APA Chen, Jia-hui.,Huang, Yuan.,Brachi, Benjamin.,Yun, Quan-zheng.,Zhang, Wei.,...&Sun, Hang.(2019).Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot.NATURE COMMUNICATIONS,10,12.
MLA Chen, Jia-hui,et al."Genome-wide analysis of Cushion willow provides insights into alpine plant divergence in a biodiversity hotspot".NATURE COMMUNICATIONS 10(2019):12.
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