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Complete plastid genome sequence of the rare and endangered medicinal herb Psammosilene tunicoides, endemic to China
Meng, Jing1; Zhang, Linna1; He, Jun2; Zhao, Yan1
Corresponding AuthorZhao, Yan(zhaoyan@ynau.edu.cn)
2019-07-03
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
ISSN2380-2359
Volume4Issue:2Pages:2343-2344
AbstractPsammosilene tunicoides W.C. Wu et C.Y. Wu, a monotypic species and endemic to Southwest China, is a rare and endangered traditional medicinal herb with satisfactory effects on multifold pathology. In order to provide crucial data for protection, we reported and analyzed the complete plastid genome of P. tunicoides as the foundation of germplasm conservation. The complete plastid genome is a typical quadripartite circular molecule of 153,957 bp in length, including a large single copy (LSC) region of 83,972 bp and a small single copy (SSC) region of 17,495 bp separated by two inverted repeat (IR) regions of 26,245 bp. In total of 111 unique genes were predicted, including 78 protein-coding genes (PCGs), 29 transfer RNA genes, and four ribosomal RNA genes. The overall GC content of P. tunicoides is 36.5%. The phylogenetic analysis revealed that P. tunicoides and Dianthus caryophyllus formed an independent clade with a 100% bootstrap support.
KeywordPsammosilene tunicoides W C Wu et C Y Wu complete plastid genome rare and endemic species phylogenetic analysis
DOI10.1080/23802359.2019.1629348
Indexed BySCI
Language英语
WOS Research AreaGenetics & Heredity
WOS SubjectGenetics & Heredity
WOS IDWOS:000475307200001
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Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/67905
Collection中国西南野生生物种质资源库
Corresponding AuthorZhao, Yan
Affiliation1.Yunnan Agr Univ, Coll Hort & Landscape, Kunming 650201, Yunnan, Peoples R China
2.Chinese Acad Sci, Kunming Inst Bot, Kunming, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Meng, Jing,Zhang, Linna,He, Jun,et al. Complete plastid genome sequence of the rare and endangered medicinal herb Psammosilene tunicoides, endemic to China[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2019,4(2):2343-2344.
APA Meng, Jing,Zhang, Linna,He, Jun,&Zhao, Yan.(2019).Complete plastid genome sequence of the rare and endangered medicinal herb Psammosilene tunicoides, endemic to China.MITOCHONDRIAL DNA PART B-RESOURCES,4(2),2343-2344.
MLA Meng, Jing,et al."Complete plastid genome sequence of the rare and endangered medicinal herb Psammosilene tunicoides, endemic to China".MITOCHONDRIAL DNA PART B-RESOURCES 4.2(2019):2343-2344.
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