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Complete chloroplast genome sequences of Debregeasia orientalis (Urticaceae)
Wang, Ruo-Nan1,2; Liu, Jie3; Li, Zhong-Hu2; Wu, Zeng-Yuan1
Corresponding AuthorLi, Zhong-Hu(lizhonghu@nwu.edu.cn) ; Wu, Zeng-Yuan(wuzengyuan@mail.kib.ac.cn)
2019-01-02
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
ISSN2380-2359
Volume4Issue:1Pages:1830-1831
AbstractDebregeasia orientalis is an economically and ecologically important species, which belongs to the genus Debregeasia within the family Urticaceae. The complete chloroplast genome size of D. orientalis is 155,894 bp in length, including a large single copy (LSC) region of 85,558 bp, a small single copy (SSC) region of 19,064 bp, and a pair of inverted repeats (IRs) of 25,636 bp. The genome contains 112 genes, including 78 protein-coding genes, 30 tRNA genes, and four rRNA genes. The GC content in chloroplast genome, LSC region, SSC region, and IR region were 36.3%, 34.0%, 29.4%, and 42.7%, respectively. A total of 15 species are used to construct the phylogenetic tree of Rosales, employing the maximum likelihood (ML), and the results showed that D. orientalis is closely related to Debregeasia saeneb.
KeywordDebregeasia orientalis chloroplast genome phylogenetic tree
DOI10.1080/23802359.2019.1604186
Indexed BySCI
Language英语
WOS IDWOS:000467715900001
Citation statistics
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/67584
Collection中国西南野生生物种质资源库
Corresponding AuthorLi, Zhong-Hu; Wu, Zeng-Yuan
Affiliation1.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China
2.Northwest Univ, Coll Life Sci, Key Lab Resource Biol & Biotechnol Western China, Minist Educ, Xian 710069, Shaanxi, Peoples R China
3.Chinese Acad Sci, Kunming Inst Bot, Key Lab Biodivers & Biogeog East Asia, Kunming, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Wang, Ruo-Nan,Liu, Jie,Li, Zhong-Hu,et al. Complete chloroplast genome sequences of Debregeasia orientalis (Urticaceae)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2019,4(1):1830-1831.
APA Wang, Ruo-Nan,Liu, Jie,Li, Zhong-Hu,&Wu, Zeng-Yuan.(2019).Complete chloroplast genome sequences of Debregeasia orientalis (Urticaceae).MITOCHONDRIAL DNA PART B-RESOURCES,4(1),1830-1831.
MLA Wang, Ruo-Nan,et al."Complete chloroplast genome sequences of Debregeasia orientalis (Urticaceae)".MITOCHONDRIAL DNA PART B-RESOURCES 4.1(2019):1830-1831.
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