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Characterization of the complete plastid genome of a Chinese Endangered Species Rosa rugosa Thunb.
Jiang, Hui1; He, Jun2; Meng, Jing1
Corresponding AuthorMeng, Jing(mengjing2514@163.com)
2019-01-02
Source PublicationMITOCHONDRIAL DNA PART B-RESOURCES
ISSN2380-2359
Volume4Issue:1Pages:1679-1680
AbstractRosa rugosa Thunb. is an endangered species in China and also an invasive species in Northern Europe with important ornamental value, economic value, and breeding value, especially wild R. rugosa. In this study, the complete plastid genome of R. rugosa was sequenced and analyzed using next-generation DNA sequencing technology. We subjected the genomic analyses and constructed the maternal phylogenetic relationships. The complete plastid genome was 157,110 bp in length, including a large single copy (LSC) region of 86,214 bp, a small single copy (SSC) region of 18,820 bp and a pair of inverted repeat (IR) regions of 26,038 bp. In total of 116 unique genes were identified, containing 79 protein-coding genes (PCGs), 30 transfer RNA genes, four ribosomal RNA genes, and three pseudogenes (psi ycf1, psi ycf15, psi ycf68), respectively. The phylogenetic analysis revealed that R. rugosa and R. praelucens formed an independent clade with a 100% bootstrap support.
KeywordRosa rugosa plastid genome endangered species phylogenetic analysis
DOI10.1080/23802359.2019.1607590
Indexed BySCI
Language英语
WOS IDWOS:000465379000001
Citation statistics
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/66153
Collection中国西南野生生物种质资源库
Corresponding AuthorMeng, Jing
Affiliation1.Yunnan Agr Univ, Coll Hort & Landscape, Kunming 650201, Yunnan, Peoples R China
2.Chinese Acad Sci, Kunming Inst Bot, Kunming, Yunnan, Peoples R China
Recommended Citation
GB/T 7714
Jiang, Hui,He, Jun,Meng, Jing. Characterization of the complete plastid genome of a Chinese Endangered Species Rosa rugosa Thunb.[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2019,4(1):1679-1680.
APA Jiang, Hui,He, Jun,&Meng, Jing.(2019).Characterization of the complete plastid genome of a Chinese Endangered Species Rosa rugosa Thunb..MITOCHONDRIAL DNA PART B-RESOURCES,4(1),1679-1680.
MLA Jiang, Hui,et al."Characterization of the complete plastid genome of a Chinese Endangered Species Rosa rugosa Thunb.".MITOCHONDRIAL DNA PART B-RESOURCES 4.1(2019):1679-1680.
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