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Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China
Ya, Ji-Dong1; Yu, Zhi-Xiang2; Yang, Yan-Qiong2; Zhang, Shu-Dong1; Zhang, Zhi-Rong1; Cai, Jie1; Yang, Jun-Bo1; Yu, Wen-Bin3,4
2018-12-01
Source PublicationCONSERVATION GENETICS RESOURCES
ISSN1877-7252
Volume10Issue:4Pages:713-715
AbstractFirmiana major is an endangered species in southwest China, which had been considered as extinct in the wild on the IUCN Red List of Threatened Species in 1998. Fortunately, around 2000 wild individuals were rediscovered along the valley of Jinshajiang river in south Sichuan and north Yunnan. In this study, we reported a complete chloroplast genome of F. major, which was de novo assembled using the next-generation sequencing data. The plastome was 161,302 bp in length, consisting of a pair of inverted repeat (25,543 bp for each), one large single copy (90,178 bp) and one small single copy (20,038 bp) regions. The whole genome contained 132 genes, including 87 protein-coding, 37 tRNA and 8 rRNA genes. The overall GC content of the whole genome was 36.9%. Maximum likelihood analysis showed that F. major was sister to Tilia spp.
KeywordFirmiana major Plastid genome Malvaceae IUCN Endangered species
Indexed BySCI
Language英语
Document Type期刊论文
Identifierhttp://ir.kib.ac.cn/handle/151853/64407
Collection中国西南野生生物种质资源库
Corresponding AuthorYu, Wen-Bin
Affiliation1.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China
2.Natl Nat Reserve Panzhihua Cycad Sichuan Prov, Panzhihua 617000, Sichuan, Peoples R China
3.Ctr Integrat Conservat, Xishuangbanna Trop Bot Garden, Mengla 666303, Yunnan, Peoples R China
4.Chinese Acad Sci, Southeast Asia Biodivers Res Inst, Yezin 05282, Nay Pyi Taw, Myanmar
Recommended Citation
GB/T 7714
Ya, Ji-Dong,Yu, Zhi-Xiang,Yang, Yan-Qiong,et al. Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China[J]. CONSERVATION GENETICS RESOURCES,2018,10(4):713-715.
APA Ya, Ji-Dong.,Yu, Zhi-Xiang.,Yang, Yan-Qiong.,Zhang, Shu-Dong.,Zhang, Zhi-Rong.,...&Yu, Wen-Bin.(2018).Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China.CONSERVATION GENETICS RESOURCES,10(4),713-715.
MLA Ya, Ji-Dong,et al."Complete chloroplast genome of Firmiana major (Malvaceae), a critically endangered species endemic to southwest China".CONSERVATION GENETICS RESOURCES 10.4(2018):713-715.
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