Nonindependent domestication of the two rice subspecies, Oryza sativa ssp indica and ssp japonica, demonstrated by multilocus microsatellites

doi:10.1534/genetics.106.068072

	Nonindependent domestication of the two rice subspecies, Oryza sativa ssp indica and ssp japonica, demonstrated by multilocus microsatellites
	Gao, Li-zhi1 ; Innan, Hideki 2,3
	2008-06-01
发表期刊	GENETICS
卷号	179 期号:2 页码:965-976
摘要	The origins of the Asian cultivated rice Oryza sativa from its wild ancestor O. rufipogon have been debated for decades. The question mainly concerns whether it originated monophyletically or polyphyletically. To shed light on the origins and demographic history of rice domestication, we genotyped a total of 92 individual plants from the two O. sativa subspecies and O. rufipogon for 60 microsatellites. An approximate Bayesian method was applied to estimate demographic parameters for O. rafitpogon vs. O. sativa ssp. indica and O. rufipogon vs. O. sativa ssp. japonica. We showed that the japonica subspecies suffered a more severe bottleneck than the indica subspecies and thus a greater loss of genetic variation during its domestication. Across microsatellite loci there is a significant positive correlation in the reduction of genetic diversity between the two subspecies. The results suggest that completely independent domestication of indica and japonica subspecies may not explain our data and that there is at least partial sharing of their ancestral populations and/or recent gene flow between them.
学科领域	Genetics & Heredity
DOI	10.1534/genetics.106.068072
收录类别	SCI
语种	英语
WOS记录号	WOS:000256892800021
引用统计
文献类型	期刊论文
条目标识符	http://ir.kib.ac.cn/handle/151853/11221
专题	中国西南野生生物种质资源库
作者单位	1.Chinese Acad Sci, Plant Germplasm & Genom Ctr, Kunming Inst Bot, Kunming 650204, Peoples R China 2.Univ Texas Houston, Hlth Sci Ctr, Sch Publ Hlth, Ctr Human Genet, Houston, TX 77030 USA 3.Grad Univ Adv Studies, Sch Adv Sci, Kanagawa 2400193, Japan
推荐引用方式 GB/T 7714	Gao, Li-zhi,Innan, Hideki. Nonindependent domestication of the two rice subspecies, Oryza sativa ssp indica and ssp japonica, demonstrated by multilocus microsatellites[J]. GENETICS,2008,179(2):965-976.
APA	Gao, Li-zhi,&Innan, Hideki.(2008).Nonindependent domestication of the two rice subspecies, Oryza sativa ssp indica and ssp japonica, demonstrated by multilocus microsatellites.GENETICS,179(2),965-976.
MLA	Gao, Li-zhi,et al."Nonindependent domestication of the two rice subspecies, Oryza sativa ssp indica and ssp japonica, demonstrated by multilocus microsatellites".GENETICS 179.2(2008):965-976.

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